PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009767276.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 340aa    MW: 37988.2 Da    PI: 4.3422
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009767276.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.47.6e-18109158154
             AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                     s+ykGVr++k +g+W+AeI+d +     + +r++lg++ ta+eA +a++  r+++e
  XP_009767276.1 109 SKYKGVRQRK-WGKWAAEICDpF-----KgRRVWLGTYSTAKEASRAYELKRLEFE 158
                     89*******9.**********55.....45**********************9987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008479.8E-13109159IPR001471AP2/ERF domain
CDDcd000181.60E-22109166No hitNo description
SuperFamilySSF541711.7E-16109158IPR016177DNA-binding domain
PROSITE profilePS5103219.203110168IPR001471AP2/ERF domain
SMARTSM003801.0E-18110174IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.0E-20110159IPR001471AP2/ERF domain
PRINTSPR003672.5E-9111122IPR001471AP2/ERF domain
PRINTSPR003672.5E-9133149IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    Send to blast
MFEPERLFSS DLENLKRNMK EKADTDRKMR KIRIVCYDPD ATDSSDDEGI NYPKSKHFVR  60
EIKLQIGNSF STPKTSETEC SFQDSNNGEK KPKNKALAKP LIQPRQGLSK YKGVRQRKWG  120
KWAAEICDPF KGRRVWLGTY STAKEASRAY ELKRLEFERM TKNSTNVSEK SSDDQNQTNT  180
NVASVSEDSA ESSASHTSHS LPSSVLELDS LTSASASTPI SGHNDNEKAS NVALEANVLE  240
QEVPELALME ETLSLAQIGE TMDLELDLEL ALMISVSILD EFVIDDFEDP PVCVIEGDDQ  300
LPPGLPDFDF DFDFDGYDES FGLMDDVPRM NGTALNIACP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009767276.10.0PREDICTED: ethylene-responsive transcription factor ERF118-like
TrEMBLM1BAU31e-150M1BAU3_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000410531e-150(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA29572351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.23e-22ERF family protein